Calificación 125cc - Gran Premio de Malasia 2009
| Pos. |
Piloto |
Equipo |
Moto |
Tiempo |
| 1 |
Marc Márquez |
Red Bull KTM Motosport |
KTM |
2:13.756 |
| 2 |
Julián Simón |
Bancaja Aspar Team |
Aprilia |
+0.055 |
| 3 |
Bradley Smith |
Bancaja Aspar Team |
Aprilia |
+0.453 |
| 4 |
Sandro Cortese |
Ajo Interwetten |
Derbi |
+0.475 |
| 5 |
Nicolás Terol |
Jack & Jones Team |
Aprilia |
+0.647 |
| 6 |
Tito Rabat |
Blusens Aprilia |
Aprilia |
+0.930 |
| 7 |
Joan Olivé |
Derbi Racing Team |
Derbi |
+1.060 |
| 8 |
Danny Webb |
Degraaf Grand Prix |
Aprilia |
+1.164 |
| 9 |
Efrén Vazquez |
Derbi Racing Team |
Derbi |
+1.219 |
| 10 |
Jonas Folger |
Ongetta Team I.S.P.A. |
Aprilia |
+1.236 |
| 11 |
Pol Espargaró |
Derbi Racing Team |
Derbi |
+1.263 |
| 12 |
Randy Krummenacher |
Degraaf Grand Prix |
Aprilia |
+1.463 |
| 13 |
Andrea Iannone |
Ongetta Team I.S.P.A. |
Aprilia |
+1.526 |
| 14 |
Lorenzo Zanetti |
Ongetta Team I.S.P.A. |
Aprilia |
+1.618 |
| 15 |
Takaaki Nakagami |
Ongetta Team I.S.P.A. |
Aprilia |
+1.680 |
| 16 |
Simone Corsi |
Jack & Jones Team |
Aprilia |
+1.699 |
| 17 |
Scott Redding |
Blusens Aprilia |
Aprilia |
+1.728 |
| 18 |
Sergio Gadea |
Bancaja Aspar Team |
Aprilia |
+1.773 |
| 19 |
Stefan Bradl |
Viessmann Kiefer Racing |
Aprilia |
+1.777 |
| 20 |
Luis Salom |
SAG-Castrol |
Honda |
+2.195 |
| 21 |
Dominique Aegerter |
Ajo Interwetten |
Derbi |
+2.522 |
| 22 |
Johann Zarco |
WTR San Marino Team |
Aprilia |
+2.608 |
| 23 |
Michael Ranseder |
Haojue Team |
Haojue |
+2.774 |
| 24 |
Cameron Beaubier |
Red Bull KTM Motosport |
KTM |
+2.777 |
| 25 |
Elly Ilias |
Air Asia Team Malaysia |
Yamaha |
+4.196 |
| 26 |
Tomoyoshi Koyama |
Loncin Racing |
Loncin |
+4.592 |
| 27 |
Jasper Iwema |
WTR San Marino Team |
Aprilia |
+4.816 |
| 28 |
Jakub Kornfeil |
Loncin Racing |
Loncin |
+4.993 |
| 29 |
Blake Leigh-Smith |
Degraaf Grand Prix |
Aprilia |
+5.868 |
| 30 |
Zulfahmi Khairuddin |
Air Asia Team Malaysia |
Yamaha |
+5.899 |
| 31 |
Luca Marconi |
CBC Corse |
Aprilia |
+6.112 |
| 32 |
Luca Vitali |
CBC Corse |
Aprilia |
+7.371 |
| 33 |
Quentin Jacquet |
Matteoni Racing |
Aprilia |
+7.392 |