Calificación Moto3 - Gran Premio de Alemania 2016
| Pos. | Piloto | Equipo | Moto | Tiempo |
|---|---|---|---|---|
| 1 | 
Enea Bastianini |
Gresini Racing Moto3 | Honda | 1:27.129 |
| 2 |
Andrea Locatelli |
Leopard Racing | KTM | +0.319 |
| 3 | 
Arón Canet |
Estrella Galicia 0,0 | Honda | +0.372 |
| 4 | 
Bo Bendsneyder |
Red Bull KTM Ajo | KTM | +0.393 |
| 5 |
Jorge Navarro |
Estrella Galicia 0,0 | Honda | +0.409 |
| 6 | 
Brad Binder |
Red Bull KTM Ajo | KTM | +0.437 |
| 7 | 
Jules Danilo |
Ongetta-Rivacold | Honda | +0.510 |
| 8 | 
John Mcphee |
SaxoPrint RTG | Peugeot | +0.610 |
| 9 | 
Hiroki Ono |
Honda Team Asia | Honda | +0.690 |
| 10 |
Adrián Martín |
MAPFRE Team MAHINDRA | Mahindra | +0.746 |
| 11 |
Francesco Bagnaia |
ASPAR Mahindra Team Moto3 | Mahindra | +0.810 |
| 12 |
Fabio Quartararo |
Leopard Racing | KTM | +0.861 |
| 13 |
Juanfran Guevara |
RBA Racing Team | KTM | +0.888 |
| 14 | 
Gabriel Rodrigo |
RBA Racing Team | KTM | +0.893 |
| 15 | 
Jakub Kornfeil |
Drive M7 SIC Racing Team | Honda | +1.090 |
| 16 | 
Livio Loi |
RW Racing GP BV | Honda | +1.188 |
| 17 |
Romano Fenati |
SKY Racing Team VR46 | KTM | +1.194 |
| 18 |
Joan Mir |
Leopard Racing | KTM | +1.231 |
| 19 | 
Philipp Oettl |
Schedl GP Racing | KTM | +1.261 |
| 20 | 
Khairul Idham Pawi |
Honda Team Asia | Honda | +1.268 |
| 21 |
Nicolo Bulega |
SKY Racing Team VR46 | KTM | +1.273 |
| 22 |
Fabio Di Giannantonio |
Gresini Racing Moto3 | Honda | +1.295 |
| 23 |
Tatsuki Suzuki |
CIP | Mahindra | +1.340 |
| 24 |
Alexis Masbou |
Peugeot MC Saxo | Albert Arenas | +1.363 |
| 25 |
María Herrera |
Team Laglisse | Honda | +1.363 |
| 26 |
Adam Norrodin |
Drive M7 SIC Racing Team | Honda | +1.569 |
| 27 |
Stefano Valtulini |
3570 Team Italia | Stefano Valtulini | +1.651 |
| 28 |
Maximilian Kappler |
KRM-RZT | KTM | +1.826 |
| 29 |
Niccolo Antonelli |
Ongetta-Rivacold | Honda | +1.844 |
| 30 |
Andrea Migno |
SKY Racing Team VR46 | KTM | +2.214 |
| 31 |
Darryn Binder |
Platinum Bay Real Estate | Mahindra | +2.283 |
| 32 |
Lorenzo Petrarca |
3570 Team Italia | Stefano Valtulini | +2.490 |
| 33 |
Tim Georgi |
Freudenberg Racing Team | KTM | +3.136 |
| 34 |
Fabio Spiranelli |
CIP | Mahindra | +3.397 |
| 35 |
Danny Webb |
Platinum Bay Real Estate | Mahindra | +0.000 |