Carrera Moto3 - Gran Premio de San Marino 2016
| Pos. | Piloto | Equipo | Moto | Tiempo | Pts. |
|---|---|---|---|---|---|
| 1 | 
Brad Binder |
Red Bull KTM Ajo | KTM | 39:37.556 | 25 |
| 2 | 
Enea Bastianini |
Gresini Racing Moto3 | Honda | +0.262 | 20 |
| 3 | 
Joan Mir |
Leopard Racing | KTM | +1.416 | 16 |
| 4 |
Nicolo Bulega |
SKY Racing Team VR46 | KTM | +1.534 | 13 |
| 5 | 
Jakub Kornfeil |
Drive M7 SIC Racing Team | Honda | +4.278 | 11 |
| 6 |
Andrea Locatelli |
Leopard Racing | KTM | +4.387 | 10 |
| 7 |
Arón Canet |
Estrella Galicia 0,0 | Honda | +4.811 | 9 |
| 8 | 
Philipp Oettl |
Schedl GP Racing | KTM | +5.582 | 8 |
| 9 | 
Hiroki Ono |
Honda Team Asia | Honda | +6.259 | 7 |
| 10 |
Fabio Di Giannantonio |
Gresini Racing Moto3 | Honda | +10.896 | 6 |
| 11 |
Niccolo Antonelli |
Ongetta-Rivacold | Honda | +13.939 | 5 |
| 12 |
Juanfran Guevara |
RBA Racing Team | KTM | +14.091 | 4 |
| 13 | 
Livio Loi |
RW Racing GP BV | Honda | +14.103 | 3 |
| 14 | 
Jules Danilo |
Ongetta-Rivacold | Honda | +14.810 | 2 |
| 15 |
Andrea Migno |
SKY Racing Team VR46 | KTM | +14.868 | 1 |
| 16 |
Stefano Manzi |
Mahindra Racing | Mahindra | +23.292 | 0 |
| 17 |
Lorenzo Dalla Porta |
SKY Racing Team VR46 | KTM | +23.349 | 0 |
| 18 |
Fabio Quartararo |
Leopard Racing | KTM | +23.523 | 0 |
| 19 |
Albert Arenas |
Peugeot MC Saxo | Albert Arenas | +31.140 | 0 |
| 20 | 
John Mcphee |
SaxoPrint RTG | Peugeot | +35.145 | 0 |
| 21 |
Francesco Bagnaia |
ASPAR Mahindra Team Moto3 | Mahindra | +35.170 | 0 |
| 22 | 
Khairul Idham Pawi |
Honda Team Asia | Honda | +35.409 | 0 |
| 23 |
Adam Norrodin |
Drive M7 SIC Racing Team | Honda | +35.467 | 0 |
| 24 |
Lorenzo Petrarca |
3570 Team Italia | Stefano Valtulini | +48.285 | 0 |
| 25 |
Fabio Spiranelli |
CIP | Mahindra | +56.451 | 0 |
| 26 |
Stefano Valtulini |
3570 Team Italia | Stefano Valtulini | +56.486 | 0 |
| 27 |
Darryn Binder |
Platinum Bay Real Estate | Mahindra | 4 Vueltas | 0 |
| 28 |
Tatsuki Suzuki |
CIP | Mahindra | 8 Vueltas | 0 |
| 29 |
Marcos Ramírez |
Platinum Bay Real Estate | Mahindra | 10 Vueltas | 0 |
| 30 |
Jorge Navarro |
Estrella Galicia 0,0 | Honda | 16 Vueltas | 0 |
| 31 | 
Gabriel Rodrigo |
RBA Racing Team | KTM | 17 Vueltas | 0 |
| 32 |
María Herrera |
Team Laglisse | Honda | 22 Vueltas | 0 |
| 33 | 
Bo Bendsneyder |
Red Bull KTM Ajo | KTM | 0 Vuelta | 0 |
| 34 | 
Alex Fabbri |
0 Vuelta | 0 |